Assessment of Immunologically Relevant Dynamic Tertiary Structural Features of the HIV-1 V3 Loop Crown R2 Sequence by ab initio Folding
by
 
Almond, David

Title
Assessment of Immunologically Relevant Dynamic Tertiary Structural Features of the HIV-1 V3 Loop Crown R2 Sequence by ab initio Folding

Author
Almond, David

Personal Author
Almond, David

Publication Information
Cambridge, MA MyJoVE Corp 2016

Physical Description
online resource (650 seconds)

Series
Immunology and Infection

General Note
Title from resource description page

Abstract
The crown region of different V3 loop sequences of the surface envelope glycoprotein (gp120) of HIV-1 can be structurally characterized in many cases by in silico folding of positions 10 to 22 of the loop using a state-of-the-art ab initio folding algorithm. Here we demonstrate the folding and evaluation of this region of the V3 loop from the R2 strain of HIV-1, a uniquely neutralization sensitive strain with puzzling functional properties.

Reading Level
For undergraduate, graduate, and professional students

Subject Term
Immunology and Infection

Electronic Access
https://www.jove.com/t/2118


LibraryMaterial TypeItem BarcodeShelf NumberStatus
IYTE LibraryOnline Video2257977-1001XX(2257977.1)JoVe Video Online