Investigation of the interaction and olgiomerization of HIV capsid and single domain antibody as a biotechnological drug against HIV
by
 
Güney, Seniha, author.

Title
Investigation of the interaction and olgiomerization of HIV capsid and single domain antibody as a biotechnological drug against HIV

Author
Güney, Seniha, author.

Personal Author
Güney, Seniha, author.

Physical Description
xv, 87 leaves: charts;+ 1 computer laser optical disc

Abstract
Human immunodeficiency virus (HIV) causes AIDS which is still a global public health threat. Current drugs against HIV infection cannot eradicate the virus therefore, research on new drug targets continues. HIV capsid protein, which has a highly conserved sequence and is sensitive to mutations, has critical roles in the virus lifecycle, making it a high-potential drug target. A nanobody is the antigen-binding domain of heavy-chain only antibodies of camelids. Small size, thermal stability and ease of production makes nanobodies ideal antibody fragments for therapeutic and diagnostic purposes. In the literature, a nanobody binding to the HIV-1 capsid-N terminal domain (NTD) has been reported. The aim of this thesis is to examine the potential of this nanobody as a biotechnological drug candidate against the HIV-1 and HIV-2 capsid proteins. In the study, HIV-1 capsid was expressed, purified and biophysically characterized. Thermal and chemical denaturation of the protein were done, the melting temperature and unfolding free-energy values of the protein were determined. In-vitro oligomerization of the HIV-1 capsid was performed and observed that the protein self-oligomerized over time. Pure HIV-2 capsid protein could not be produced recombinantly. Thereupon, HIV1 capsid-NTD and HIV-2 capsid-NTD proteins were expressed and purified. Secondary structure of HIV-1 capsid, HIV-1 capsid-NTD and nanobody were analyzed with circular dichroism (CD) spectroscopy and the results matched with the literature. Isothermal titration calorimetry (ITC) experiments were done to examine the HIV-1 capsidnanobody interaction, but good binding was not observed between the two proteins. Future work requires repeating ITC experiments.

Subject Term
HIV antibodies.
 
Capsid proteins
 
Monoclonal antibodies

Added Author
Taşkent Sezgin, Hümeyra,

Added Corporate Author
İzmir Institute of Technology. Bioengineering.

Added Uniform Title
Thesis (Master)--İzmir Institute of Technology: Bioengineering.
 
İzmir Institute of Technology: Bioengineering--Thesis (Master).

Electronic Access
Access to Electronic Versiyon.


LibraryMaterial TypeItem BarcodeShelf NumberStatus
IYTE LibraryThesisT002553QR201.A37 G97 2022Tez Koleksiyonu
IYTE LibrarySupplementary CD-ROMROM3696QR201.A37 G97 2022 EK.1Tez Koleksiyonu