Foundational Topics in Medical Informatics -- Knowledge Management, Data Mining, and Text Mining in Medical Informatics -- Mapping Medical Informatics Research -- Bioinformatics Challenges and Opportunities -- Managing Information Security and Privacy in Healthcare Data Mining -- Ethical and Social Challenges of Electronic Health Information -- Information and Knowledge Management -- Medical Concept Representation -- Characterizing Biomedical Concept Relationships -- Biomedical Ontologies -- Information Retrieval and Digital Libraries -- Modeling Text Retrieval in Biomedicine -- Public Access to Anatomic Images -- 3D Medical Informatics -- Infectious Diseaxe Informatics and Outbreak detection -- Text Mining and Data Mining -- Semantic Interpretation for the Biomedical Research Literature -- Semantic Text Parsing for Patient Records -- Identification of Biological Relationships from Text Documents -- Creating, Modeling, and Visualizing Metabolic Networks -- Gene Pathway Text Mining and Visualization -- The Genomic Data Mine -- Exploratory Genomic Data Analysis -- Joint Learning Using Multiple Types of Data and Knowledge.