
Outcome Prediction in Cancer.
Title:
Outcome Prediction in Cancer.
Author:
Taktak, Azzam F.G.
ISBN:
9780080468037
Personal Author:
Physical Description:
1 online resource (483 pages)
Contents:
Front cover -- Title page -- Copyright page -- Foreword -- Table of Contents -- Contributors -- Introduction -- Section 1: The Clinical Problem -- Chapter 1: The Predictive Value of Detailed Histological Staging of Surgical Resection Specimens in Oral Cancer -- 1. INTRODUCTION -- 2. PREDICTIVE FEATURES RELATED TO THE PRIMARY TUMOUR -- 3. PREDICTIVE FEATURES RELATED TO THE REGIONAL LYMPH NODES -- 4. DISTANT (SYSTEMIC) METASTASES -- 5. GENERAL PATIENT FEATURES -- 6. MOLECULAR AND BIOLOGICAL MARKERS -- 7. THE WAY AHEAD? -- REFERENCES -- Chapter 2: Survival after Treatment of Intraocular Melanoma -- 1. INTRODUCTION -- 2. INTRAOCULAR MELANOMA -- 3. STATISTICAL METHODS FOR PREDICTING METASTATIC DISEASE -- 4. PREDICTING METASTATIC DEATH WITH NEURAL NETWORKS -- 5. MISCELLANEOUS ERRORS -- 6. A NEURAL NETWORK FOR PREDICTING SURVIVAL IN UVEAL MELANOMA PATIENTS -- 7. CAVEATS REGARDING INTERPRETATION OF SURVIVAL STATISTICS -- 8. FURTHER STUDIES -- 9. CONCLUSIONS -- REFERENCES -- Chapter 3: Recent Developments in Relative Survival Analysis -- 1. INTRODUCTION -- 2. CAUSE-SPECIFIC SURVIVAL -- 3. INDEPENDENCE ASSUMPTION -- 4. EXPECTED SURVIVAL -- 5. RELATIVE SURVIVAL -- 6. POINT OF CURE -- 7. REGRESSION ANALYSIS -- 8. PERIOD ANALYSIS -- 9. AGE STANDARDIZATION -- 10. PARAMETRIC METHODS -- 11. MULTIPLE TUMOURS -- 12. CONCLUSION -- REFERENCES -- Section 2: Biological and Genetic Factors -- Chapter 4: Environmental and Genetic Risk Factors of Lung Cancer -- 1. INTRODUCTION -- 2. LUNG CANCER INCIDENCE AND MORTALITY -- 3. CONCLUSION -- REFERENCES -- Chapter 5: Chaos, Cancer, the Cellular Operating System and the Prediction of Survival in Head and Neck Cancer -- 1. INTRODUCTION -- 2. CANCER AND ITS CAUSATION -- 3. FUNDAMENTAL CELL BIOLOGY AND ONCOLOGY -- 4. A NEW DIRECTION FOR FUNDAMENTAL CELL BIOLOGY AND ONCOLOGY.
5. COMPLEX SYSTEMS ANALYSIS AS APPLIED TO BIOLOGICAL SYSTEMS AND SURVIVAL ANALYSIS -- 6. METHODS OF ANALYSING FAILURE IN BIOLOGICAL SYSTEMS -- 7. A COMPARISON OF A NEURAL NETWORK WITH COX'S REGRESSION IN PREDICTING SURVIVAL IN OVER 800 PATIENTS -- 8. THE NEURAL NETWORK AND FUNDAMENTAL BIOLOGY AND ONCOLOGY -- 9. THE DIRECTION OF FUTURE WORK -- 10. SUMMARY -- REFERENCES -- Section 3: Mathematical Background of Prognostic Models -- Chapter 6: Flexible Hazard Modelling for Outcome Prediction in Cancer: Perspectives for the Use of Bioinformatics Knowledge -- 1. INTRODUCTION -- 2. FAILURE TIME DATA -- 3. PARTITION AND GROUPING OF FAILURE TIMES -- 4. COMPETING RISKS -- 5. GLMs AND FFANNs -- 6. APPLICATIONS TO CANCER DATA -- 7. CONCLUSIONS -- REFERENCES -- Chapter 7: Information Geometry for Survival Analysis and Feature Selection by Neural Networks -- 1. INTRODUCTION -- 2. SURVIVAL FUNCTIONS -- 3. STANDARD MODELS FOR SURVIVAL ANALYSIS -- 4. THE NEURAL NETWORK MODEL -- 5. LEARNING IN THE CPENN MODEL -- 6. THE BAYESIAN APPROACH TO MODELLING -- 7. VARIABLE SELECTION -- 8. THE LAYERED PROJECTION ALGORITHM -- 9. A SEARCH STRATEGY -- 10. EXPERIMENTS -- 11. CONCLUSION -- REFERENCES -- Chapter 8: Artificial Neural Networks Used in the Survival Analysis of Breast Cancer Patients: A Node-Negative Study -- 1. INTRODUCTION -- 2. BREAST CANCER -- 3. STATISTICAL METHODS IN SURVIVAL ANALYSIS FOR BREAST CANCER CENSORED DATA -- 4. PARAMETRIC MODELS AND COX REGRESSION FOR BREAST CANCER DATA -- 5. ARTIFICIAL NEURAL NETWORKS FOR CENSORED SURVIVAL DATA -- 6. DATA DESCRIPTION -- 7. NODE-NEGATIVE BREAST CANCER PROGNOSIS -- 8. CONCLUSIONS -- REFERENCES -- Section 4: Application of Machine Learning Methods -- Chapter 9: The Use of Artificial Neural Networks for the Diagnosis and Estimation of Prognosis in Cancer Patients -- 1. INTRODUCTION.
2. ARTIFICIAL NEURAL NETWORK ARCHITECTURE: BASIC CONCEPTS -- 3. APPLICATION OF ARTIFICIAL NEURAL NETWORKS TO THE ESTIMATION OF THE PROGNOSIS OF INDIVIDUAL CANCER PATIENTS -- 4. EXAMPLES OF ARTIFICIAL NEURAL NETWORK APPLICATIONS IN CANCER RESEARCH -- 5. CONCLUSIONS -- REFERENCES -- Chapter 10: Machine Learning Contribution to Solve Prognostic Medical Problems -- 1. INTRODUCTION -- 2. MACHINE LEARNING -- 3. CHARACTERISTICS OF MEDICAL APPLICATIONS -- 4. APPLICATION -- 5. LEARNING STRUCTURED DATA IN MEDICINAL CHEMISTRY AND PERSPECTIVES -- 6. CONCLUSIONS -- REFERENCES -- Chapter 11: Classification of Brain Tumours by Pattern Recognition of Magnetic Resonance Imaging and Spectroscopic Data -- 1. INTRODUCTION -- 2. MAGNETIC RESONANCE -- 3. PATTERN RECOGNITION -- 4. PATTERN RECOGNITION TECHNIQUES -- 5. TOWARDS A MEDICAL DECISION SUPPORT SYSTEM USING MR DATA -- REFERENCES -- Chapter 12: Towards Automatic Risk Analysis for Hereditary Non-Polyposis Colorectal Cancer Based on Pedigree Data -- 1. INTRODUCTION -- 2. DESCRIPTION OF THE PEDIGREE DATABASE -- 3. HNPCC RISK ASSESSMENT -- 4. RESULTS AND DISCUSSION -- 5. SUMMARY -- REFERENCES -- Chapter 13: The Impact of Microarray Technology in Brain Cancer -- 1. INTRODUCTION -- 2. PREPROCESSING MICROARRAY DATA -- 3. CLUSTERING OF MICROARRAY DATA OF BRAIN CANCER -- 4. CLASSIFICATION OF MICROARRAY DATA OF BRAIN CANCER -- 5. CLINICAL VERSUS GENETIC ANALYSIS OF BRAIN CANCER -- 6. CONCLUSIONS -- REFERENCES -- Section 5: Dissemination of Information -- Chapter 14: The Web and the New Generation of Medical Information Systems -- 1. INTRODUCTION -- 2. PATIENTS ONLINE -- 3. ELECTRONIC HEALTH RECORD -- 4. DISTRIBUTED ELECTRONIC HEALTHCARE RECORDS -- 5. CONCLUSIONS -- REFERENCES -- Chapter 15: Geoconda: A Web Environment for Multi-Centre Research -- 1. INTRODUCTION -- 2. MATERIAL AND METHODS.
3. DESCRIPTION OF THE GEOCONDA WEBSITE -- 4. DISCUSSION -- 5. SUMMARY AND CONCLUSIONS -- 6. FUTURE WORK -- REFERENCES -- Chapter 16: The Development and Execution of Medical Prediction Models -- 1. INTRODUCTION -- 2. METHODOLOGY -- 3. NOMOGRAM -- 4. SOFTWARE -- REFERENCES -- Subject Index.
Abstract:
This book is organized into 4 sections, each looking at the question of outcome prediction in cancer from a different angle. The first section describes the clinical problem and some of the predicaments that clinicians face in dealing with cancer. Amongst issues discussed in this section are the TNM staging, accepted methods for survival analysis and competing risks. The second section describes the biological and genetic markers and the rôle of bioinformatics. Understanding of the genetic and environmental basis of cancers will help in identifying high-risk populations and developing effective prevention and early detection strategies. The third section provides technical details of mathematical analysis behind survival prediction backed up by examples from various types of cancers. The fourth section describes a number of machine learning methods which have been applied to decision support in cancer. The final section describes how information is shared within the scientific and medical communities and with the general population using information technology and the World Wide Web. * Applications cover 8 types of cancer including brain, eye, mouth, head and neck, breast, lungs, colon and prostate * Include contributions from authors in 5 different disciplines * Provides a valuable educational tool for medical informatics.
Local Note:
Electronic reproduction. Ann Arbor, Michigan : ProQuest Ebook Central, 2017. Available via World Wide Web. Access may be limited to ProQuest Ebook Central affiliated libraries.
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