Cover image for Visualizing Soil Microorganisms via the Contact Slide Assay and Microscopy
Visualizing Soil Microorganisms via the Contact Slide Assay and Microscopy
Title:
Visualizing Soil Microorganisms via the Contact Slide Assay and Microscopy
Author:
Pepper, Ian
Personal Author:
Publication Information:
Cambridge, MA MyJoVE Corp 2016
Physical Description:
online resource (604 seconds)
Series:
Science Education: Environmental Microbiology
General Note:
Title from resource description page
Abstract:
Source: Laboratories of Dr. Ian Pepper and Dr. Charles Gerba - The University of Arizona Demonstrating Author: Bradley Schmitz Soil comprises the thin layer at the earth's surface, containing biotic and abiotic factors that contribute to life. The abiotic portion includes inorganic particles ranging in size and shape that determine the soil's texture. The biotic portion incorporates plant residues, roots, organic matter, and microorganisms. Soil microbe abundance and diversity is expansive, as one gram of soil contains 107-8 bacteria, 106-8 actinomycetes, 105-6 fungi, 103 yeast, 104-6 protozoa, 103-4 algae, and 53 nematodes. Together, the biotic and abiotic factors form architectures around plant roots, known as the rhizosphere, that provide favorable conditions for soil microorganisms. Biotic and abiotic factors promote life in soils. However, they also contribute stressful dynamics that limit microbes. Biotic stress involves competition amongst life to adapt and survive in environmental conditions. For example, microbes can secrete inhibitory or toxic substances to harm neighboring microorganisms. Penicillium notatum is a notorious fungus, as it reduces competition for nutrients by producing an antimicrobial, which humans harvest to create the pharmaceutical penicillin. Abiotic stresses arise from physical or chemical properties limiting microbial survival, such as light, moisture, temperature, pH, nutrients, and texture.
Reading Level:
For undergraduate, graduate, and professional students
Electronic Access:
https://www.jove.com/t/10053
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